@omicverse/dsh-omicos

OmicOS as a deepseek-harness (dsh) plugin — Mode A: omicos bioinformatics tools + background jobs + login commands for the dsh agent (DSH-PLUGIN.md).

AI Analysis

将 OmicOS 生物信息学工具链集成至 DSH。适合从事生物信息学研究、需要 AI 智能体辅助处理基因组学等生物数据分析任务的科研人员。

Agents

Package: @omicverse/dsh-omicos
Version: 0.2.1
License: GPL-3.0
Last updated: Aug 17, 2026

Install

$npx -p @deepseek-ai/dsh dsh plugin --profile web add github:omicverse/dsh-omicos

README

Read the full README ↗

Configuration

Override in your profile's own cordis.patch.yml. A patch replaces the row's whole config — there is no deep merge — so restate every key you care about:

- id: omicos
  config:
    workspace: /path/to/project   # '' = follow each dsh session's own cwd
    autoStart: true               # spawn a kernel when none is attachable
    upstreamBaseUrl: https://auth.omicos.cn
    npmRegistry: ''               # mirror knob for the kernel spawn