ZengZichao/dsh-revbayes-forge--packages-pack-ted ↗★ 0

dsh-revbayes-forge-pack-ted

RevBayes Forge内置全证据定年模型包的开发测试夹具。 适合需要结合 FBD 与定年模型构建全证据定年(TED)脚本的开发者。

套件
dsh-revbayes-forge-pack-ted
相容性
待驗證
版本
0.1.0
授權
GPL-3.0
最近更新
2026年10月23日

安裝

此插件尚未提供可驗證的 bundle,或相容性檢查未通過。請先閱讀倉庫說明。 閱讀完整 README ↗

Total Evidence Dating pack

Development fixture package dsh-revbayes-forge-pack-ted of the RevBayes Forge plugin (dsh-revbayes-forge).

English

  • Pack id: ted
  • Tool: revbayes_generate_ted
  • Maturity: verified (enabled by default)

What it generates. Builds total-evidence dating scripts by orchestrating the fbd and dating packs: it takes an FBD baseline spec or script, adds extant clade ages, optional calibrations, and TED-specific monitors and MCMC settings. If either dependency is disabled, the pack stays blocked and its tool is not registered.

Analyses.

AnalysisTitleCanonical golden
tedTEDted.Rev
ted_rangeTED with ranges—

Full spec fields, data requirements, and limitations: docs/en/model-packs.md.

Fixtures. Files under fixtures/ are synthetic small datasets shipped with the repository; they back the golden scripts, canonical specs, and runtime checks used by npm test and npm run test:runtime.

Enablement. Enable this pack in the settings page (RevBayes Forge → Packs); no separate installation is needed.


中文

  • Pack id:ted
  • 工具:revbayes_generate_ted
  • 成熟度:verified(默认启用)

生成内容。 通过编排 fbd 与 dating 两个包生成全证据定年(TED)脚本:以 FBD 基线 spec 或脚本为起点,追加现生支系年龄、可选校准,以及 TED 专属的 monitors 与 MCMC 设置。任一依赖未启用时该包保持 blocked,不注册工具。

分析列表。

AnalysisTitleCanonical golden
tedTEDted.Rev
ted_rangeTED with ranges—

完整 spec 字段、数据要求与限制:docs/zh/model-packs.md。

夹具数据。 fixtures/ 下的文件均为随仓库分发的合成小数据,支撑 golden 脚本、canonical spec 与运行时检查,供 npm test 与 npm run test:runtime 使用。

启用方式。 在设置页(RevBayes Forge → Packs)勾选启用即可,无需单独安装。