dsh-revbayes-forge-pack-biogeo

Biogeography pack

Development fixture package dsh-revbayes-forge-pack-biogeo of the RevBayes Forge plugin (dsh-revbayes-forge).

English

• Pack id: biogeo
• Tool: revbayes_generate_biogeo
• Maturity: golden

What it generates. Builds biogeographic scripts: DEC range evolution, GeoSSE, feature-informed geographic state-dependent speciation-extinction (FIG / MultiFIG), and epoch-structured TimeFIG. Range, area, adjacency, and epoch inputs are aligned and validated before generation; TimeFIG additionally requires an epoch list.

Analyses.

Analysis	Title	Canonical golden
dec	DEC	dec.Rev
geosse	GeoSSE	geosse.Rev
fig	FIG	fig.Rev
multifig	MultiFIG	—
timefig	TimeFIG	—

Full spec fields, data requirements, and limitations: docs/en/model-packs.md.

Fixtures. Files under fixtures/ are synthetic small datasets shipped with the repository; they back the golden scripts, canonical specs, and runtime checks used by npm test and npm run test:runtime.

Enablement. Enable this pack in the settings page (RevBayes Forge → Packs); no separate installation is needed.

---

中文

• Pack id：biogeo
• 工具：revbayes_generate_biogeo
• 成熟度：golden

生成内容。 生成生物地理学脚本：DEC 分布区演化、GeoSSE、feature-informed 地理状态依赖物种形成-灭绝（FIG / MultiFIG），以及带 epoch 结构的 TimeFIG。生成前对分布区、区域、邻接与 epoch 输入做对齐与校验；TimeFIG 还要求提供 epoch 列表。

分析列表。

Analysis	Title	Canonical golden
dec	DEC	dec.Rev
geosse	GeoSSE	geosse.Rev
fig	FIG	fig.Rev
multifig	MultiFIG	—
timefig	TimeFIG	—

完整 spec 字段、数据要求与限制：docs/zh/model-packs.md。

夹具数据。 fixtures/ 下的文件均为随仓库分发的合成小数据，支撑 golden 脚本、canonical spec 与运行时检查，供 npm test 与 npm run test:runtime 使用。

启用方式。 在设置页（RevBayes Forge → Packs）勾选启用即可，无需单独安装。